September 23-24, 2025
Texas Advanced Computing Center
Pickle Research Campus | Austin, TX
Speakers
Dr. Chengkai Li
Professor, Department of Computer Science and Engineering
The University of Texas at Arlington
From Fact-Checking to Climate Action: GPU-Accelerated Data Science for Social Good
Dr. Chengkai Li is a Professor and Associate Chair in the Department of Computer Science and Engineering at the University of Texas at Arlington. He is Director of the Innovative Database and Information Systems Research Laboratory (IDIR) and Co-Director of the Center for Artificial Intelligence and Big Data (CARIDA). He also holds an affiliate faculty appointment with the Center for Innovation in Health Informatics (CIHI).
Dr. Li received his Ph.D. in Computer Science from the University of Illinois at Urbana-Champaign in 2007, and his M.E. and B.S. degrees in Computer Science from Nanjing University in 2000 and 1997, respectively.
His research interests lie at the intersection of data management, natural language processing, machine learning, and data mining, with applications in computational journalism, smart agriculture, health informatics, and transportation systems. His current work addresses challenges in data-driven fact-checking and web credibility, knowledge graph construction and usability, motivational message generation, and social sensing.
Dr. Soumya Mohanty
Professor, Department of Physics and Astronomy
The University of Texas at Rio Grande Valley
Computational and Statistical Challenges in Gravitational Wave Astronomy
Dr. Mohanty is a Professor in the Department of Physics and Astronomy at the University of Texas Rio Grande Valley (UTRGV). He serves as the Principal Investigator of UTRGV’s South Texas AI Research, Training, and Education Resources (STARTER) project—an ambitious initiative designed to build a robust foundation for AI-driven research and education. Through this program, Dr. Mohanty is advancing faculty and student expertise in AI technologies and empowering them to lead independent, innovative AI projects.
He earned his Ph.D. in Physics from the Inter-University Centre for Astronomy and Astrophysics in 1997, following an M.Sc. and B.Sc. in Physics from Delhi University in 1993 and 1991, respectively.
A leader in gravitational wave (GW) astronomy, Dr. Mohanty developed a regularized coherent network analysis method, a key component of the data analysis pipeline that enabled the first-ever detection of gravitational waves. His contributions also extend to Gamma Ray Burst (GRB)–triggered analyses, and he has been a pioneer in introducing Swarm Intelligence techniques to GW data analysis—an innovation that has recently spurred advances in statistical methodologies.
Dr. Vagheesh M. Narasimhan
Assistant Professor, Department of Integrative Biology, Department of Statistics and Data Science
The University of Texas at Austin
Understanding the Past 10,000 Years of Human Prehistory through the lens of Ancient DNA
Dr. Narasimhan joined The University of Texas at Austin as an Assistant Professor in the Departments of Integrative Biology, Statistics and Data Sciences and Population Health in Fall 2020. He is the PI of the Narasinham Lab, an inter-disciplinary research group at the interface of AI and Genomics in the Department of Integrative Biology and the Department of Statistics and Data Science in the College of Natural Sciences at The University of Texas at Austin as well as the Health Informatics and Data Sciences Division in the Department of Population Health at Dell Medical School.
He received his Ph.D. in Mathematical Genomics and Medicine from the University of Cambridge and the Wellcome Trust Sanger Institute and later completed a post-doctoral research fellowship at the Department of Genetics, Harvard Medical School.
Dr. Narasimhan is interested in problems at the intersection of genomics, computer science and statistics.
Dr. Robin R. Rohwer
Research Fellow, Baker Marine Microbial Ecology Lab, Department of Integrative Biology
The University of Texas at Austin
Two Decades of Microbial Ecology and Evolution in a Freshwater Lake
Dr. Rohwer is an NSF-funded Postdoctoral Fellow at The University of Texas at Austin in the Baker Microbial Ecology Lab. Specializing in freshwater microbial ecology and evolution, she uses DNA sequencing to explore how bacterial communities in lakes change both ecologically and evolutionarily over time.
Dr. Rohwer earned her Ph.D. in Environmental Chemistry and Technology from the University of Wisconsin–Madison, where she was involved in a study of Lake Mendota’s microbial communities. Her doctoral work provided valuable insight into how microbial genomes evolve and respond to ecological pressures. In addition to her current fellowship at UT Austin, Dr. Rohwer has held a postdoctoral role at the DOE Joint Genome Institute, expanding her expertise in large-scale metagenomic analysis.
Dr. Rohwer has published extensively—covering themes from bacterial evolution in nature to viral dynamics in lake ecosystems. Her work has been featured in outlets including Al Jazeera, HPC Wire, and Madison Magazine and she has shared her findings on podcasts and radio.
Dr. Dan Stanzione
Associate Vice President For Research, UT Austin
Executive Director, TACC
State of the Center Address
Dr. Dan Stanzione is a nationally recognized leader in the field of high performance computing who has made an impact in the open science community for more than 30 years.
He is Executive Director of the Texas Advanced Computing Center (TACC), one of the leading advanced academic computing centers in the world and holds the position of Associate Vice President for Research at The University of Texas at Austin.
Stanzione serves as the principal investigator (PI) for the U.S. National Science Foundation (NSF) Leadership Class Computing Facility (LCCF), which started construction in July 2024 and is expected to begin operations in 2026. The LCCF will deploy Horizon, which will be the largest academic supercomputer dedicated to open science research in the NSF portfolio.
Stanzione is also the PI for several current NSF-funded supercomputers including Frontera, the fastest supercomputer at a U.S. university, and Vista, an AI-centric system—all dedicated to open science research.
Stanzione received his bachelor’s degree in electrical engineering and his master's degree and doctorate in computer engineering from Clemson University.
Tutorials
Deep Learning in Life Sciences Research: Build Your Own Artificial Neural Network
Presenter: Kelsey Beavers
Deep learning is driving breakthroughs in life sciences research, including: predicting the 3D structure of proteins from their amino acid sequences; automating species recognition from image, video and sound data; translating the raw signal of long-read sequencers into nucleotide calls; predicting sample origins based on genetic variation; and many more areas. This tutorial will lead attendees through the basics of building an artificial neural network - a computational model for processing information inspired by biological neurons in the brain, and a fundamental component of deep learning models.
Successful Sustainability: Strategies for Growing Your Software and Portal Products
Presenters: Claire Stirm & Juliana Casavan
This tutorial will give attendees a deeper understanding of what it takes to create an effective sustainability plan that meets the requirements to succeed. The sustainability strategy session will cover, understanding the problem, defining the solution, identifying the audience, potential funding sources, and marketing.
Finding Funding During the New World Order
Presenter: Jonelle Bradshaw De Hernandez
Explore strategies for identifying and securing private foundation funding in a rapidly changing research and philanthropic landscape. This tutorial will highlight tools, trends, and best practices for navigating foundation databases and aligning proposals with funder priorities.
Data Transfer Strategies and NetSage
Presenters: Jen Schopf & Doug Southworth
Modern science is increasingly data-driven and collaborative in nature, producing petabytes of data that can be shared by tens to thousands of scientists all over the world. NetSage is an open privacy-aware network measurement, analysis, and visualization service designed to address the needs of today's networks. This tutorial introduces NetSage and strategies for optimizing data transfers.
Introduction to Horizon
Presenter: Lars Koesterke
Learn how to get started with Horizon, TACC’s latest high-performance computing system designed to support open science at scale. This tutorial covers the onboarding process, system capabilities, and best practices for running research workflows efficiently on Horizon.
Lightning Talks
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1 |
A Data-Intensive Pipeline to Map the Human Brain Connections for Vision Science
Gabriele Amorosino |
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2 |
Integrating MRI and Light Sheet Fluorescent Microscopy to Validate and Improve Imaging-based Tumor Modeling
Aliya Anil |
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3 |
Probing Cosmic Ray Ionization Rates in Star-Forming Clouds: Synthetic Observations with the STARFORGE Simulations
Hsin-Pei Chen |
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4 |
GPU-Accelerated Simulation of Wave–Debris–Structure Interactions: Debris Damming in Inland Coastal Forests During Tsunamis
Youngchul Choi |
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5 |
Numerical Simulations of an Array of Offshore Turbines and its Effect on the Local Circulation
Miguel Guzman-Hernandez |
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6 |
Bridging AI and Education: The Virtual Teaching Assistant
Ayesha Khalid |
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7 |
A Scalable Machine Learning Workflow for Computing Higher-Order Force Constants with Automatic Differentiation
Jaesuk Park |
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8 |
Miniaturizing Heme Copper Oxidase with Generative Protein Design
Lisa Phan |
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9 |
Sparse Annotation is Sufficient for Bootstrapping Automatic Neuron Segmentation
Vijay Venu Thiyagarajan |
Poster Presentations
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1 |
CFD-Based Large Eddy Simulations of Plunging Flows in Alexandra Canyon, Fraser River: Insights into Bed Shear, Erosion, and Morphological Changes Using TACC ResourcesJayanga Samarasinghe and Laura AlvarezEnvironmental Science and Engineering Program, The University of Texas at El Paso 2Department of Environmental and Resource Sciences, The University of Texas at El Paso |
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2 |
ClaimCheck: Real-Time Fact-Checking with Small Language ModelsAkshith Reddy Putta, Jacob Devasier, and Chengkai LiDepartment of Computer Science and Engineering, The University of Texas at Arlington |
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3 |
Miniaturizing Heme Copper Oxidase with Generative Protein DesignLisa Phan, Barshali Ghosh, and Yi LuDepartment of Chemistry, The University of Texas at Austin |
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4 |
Novel Feature Extraction from Ambulatory Blood Pressure DataRoberto Arias, Kristina Vatcheva, Vesselin Vatchev, and Gladys MaestreDepartment of Mathematical and Statistical Sciences, The University of Texas Rio Grande Valley Department of Medicine, The University of Texas Rio Grande Valley |
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5 |
Decadal Monitoring of Colonias Using Remote Sensing and Machine LearningYiming Zhang, Bridget Scanlon, Jon Paul Pierre, Brent Porter, Hassan Dashtian, and Manmeet SinghJackson School of Geosciences, The University of Texas at Austin Indian Institute of Tropical Meteorology, Ministry of Earth Sciences |
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6 |
Withdrawn |
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7 |
Lightweight Adaptive Sampling for Scalable Anomaly Detection in HPC Systems: Insights from Scientific Workloads at TACCVijayalakshmi Saravanan, Saikarthik Navuluru, Seetharam Rao Vanam, Khaled Z. Ibrahim, and Lakshman TamilDepartment of Electrical and Computer Engineering, The University of Texas at Tyler Department of Electrical and Computer Engineering, The University of Texas at Dallas Lawrence Berkeley National Laboratory |
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8 |
Mechanism of SNARE-Mediated Membrane FusionAleksandra Wosztyl and Josep RizoDepartment of Biophysics, The University of Texas Southwestern Medical Center Department of Pharmacology, University of Texas Southwestern Medical Center |
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9 |
Withdrawn |
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10 |
Recycling Spent Nuclear Fuel in a Molten Salt Reactor: Simulating Online Refueling and Tracking Waste TransmutationBradley Gladden and Derek Haas WalkerDepartment of Mechanical Engineering, The University of Texas at Austin |
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11 |
Balancing Accuracy and Urgency for Real-time Epidemic Response: How Many Stochastic Simulations is Enough?Emily Javan and William J. AllenTexas Advanced Computing Center, The University of Texas at Austin |
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12 |
Probing Cosmic Ray Ionization Rates in Star-Forming Clouds: Synthetic Observations with the STARFORGE SimulationsHsin-Pei Chen and Stella OffnerDepartment of Astronomy, The University of Texas at Austin Oden Institute, The University of Texas at Austin NSF-Simons CosmicAI Institute, The University of Texas at Austin |
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13 |
Bridging AI and Education: The Virtual Teaching AssistantAyesha Khalid, Sagnik Dakshit, and Kouider MokhtariDepartment of Computer Science, Soules College of Business, The University of Texas at Tyler College of Education and Psychology, The University of Texas at Tyler |
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14 |
Adaptive Dialogue Based Simulation in Medical LearningAkilan Amithasagaran, Sagnik Dakshit, Bhavani Suryadevara, and Lindsey StocktonDepartment of Computer Science, The University of Texas at Tyler 2Department of Gen Int Med/Hosp - MSA, UT Health Science Center at Tyler |
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15 |
Symmetry-protected Topological PolaronsKaifa Luo, Feliciano Giustino, and Jon Lafuente-BartolomeDepartment of Physics, The University of Texas at Austin Oden Institute for Computational Engineering and Sciences, The University of Texas at Austin Department of Physics, University of the Basque Country UPV/EHU |
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16 |
Strengthening Teacher Efficacy in Computer Science Education Through Hands-On CodingChanel Belvin, Elaine Anita De Melo Gomes Soares, Toni Dunlap, and James NewlandTexas Advanced Computing Center, The University of Texas at Austin |
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17 |
Integrating MRI and Light Sheet Fluorescent Microscopy to Validate and Improve Imaging-based Tumor ModelingAliya Anil, Indranil Guha, David A. Hormuth II, Ayesha Das, Deborah Healey, Puneet Kumar, Ernesto A. B. F. Lima, C. Chad Quarles, and Thomas E. YankeelovDepartment of Biomedical Engineering, The University of Texas at Austin Cancer Systems Imaging, The University of Texas MD Anderson Cancer Center Oden Institute for Computational Engineering and Sciences, The University of Texas at Austin Livestrong Cancer Institutes, The University of Texas at Austin Texas Advanced Computing Center, The University of Texas at Austin Department of Imaging Physics, The University of Texas MD Anderson Cancer Center Department of Diagnostic Medicine, The University of Texas at Austin |
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18 |
GPU-Accelerated Simulation of Wave–Debris–Structure Interactions: Debris Damming in Inland Coastal Forests During TsunamisYoungchul Choi, Jun-Whan Lee, Justin Bonus, and Che-Wei ChangMaseeh Department of Civil, Architectural and Environmental Engineering, The University of Texas at Austin Department of Civil and Environmental Engineering, University of California, Berkeley Department of Ocean Engineering, University of Rhode Island |
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19 |
Deep Learning-based Whole Corn Ear Phenotyping with 3-D Ear Surface ImagingMike Tran, Haibo Yao, and Chengkai LiDepartment of Computer Science and Engineering, The University of Texas at Arlington Agricultural Research Service, United States Department of Agriculture |
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20 |
Withdrawn |
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21 |
Evaluating Open Source LLMs for Claim Detection in Fact-CheckingAkshay Kumar Rayapet Madhusudhan, Haiqi Zhang, Zhengyuan Zhu, Zeyu Zhang, Jacob Devasier, and Chengkai LiDepartment of Computer Science and Engineering, The University of Texas at Arlington |
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22 |
Machine-Learning-Driven Discovery of Rare-Earth-Free Permanent MagnetsTimothy Liao, Zhao Tang, Qi Zhang, Masahiro Sakurai, James Chelikowsky, Weiyi Xia, Renhai Wang, Chao Zhang, Huaijun Sun, Cai-Zhuang Wang, Kai-Ming Ho, Balamurugan Balasubramanian, and David J. SellmyerOden Institute for Computational Engineering and Sciences, The University of Texas at Austin Iowa State University and Ames National Laboratory University of Nebraska, Lincoln |
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23 |
Tricuspid Valve Transcatheter Edge-to-Edge Repair Simulations Predict Kinematic AlterationsCollin Haese, Vijay Dubey, and Manuel K. RauschDepartment of Mechanical Engineering, The University of Texas at Austin Department of Aerospace Engineering & Engineering Mechanics, The University of Texas at Austin Department of Biomedical Engineering, The University of Texas at Austin Oden Institute for Computational Engineering and Sciences, The University of Texas at Austin |
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24 |
GPR174 Antagonism: Structure Function and DynamicsVijay Kumar Bhardwaj and Alemayehu GorfeDepartment of Integrative Biology and Pharmacology, The University of Texas Health Sciences Center at Houston, 2Molecular and Translational Biology & Therapeutics and Pharmacology Programs, UTHealth MD Anderson Cancer Center Graduate School of Biomedical Sciences |
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25 |
Surrogate Modeling of Cell Dynamics in Agent-Based Models Using Transformers and PINNsAn X. Vo, Jonathan I. Tamir, Thomas E. Yankeelov, and Ernesto A. B. F. LimaOden Institute for Computational Engineering and Sciences, The University of Texas at Austin Department of Electrical and Computer Engineering, The University of Texas at Austin Department of Biomedical Engineering, The University of Texas at Austin Department of Diagnostic Medicine, The University of Texas at Austin Livestrong Cancer Institutes, The University of Texas at Austin Texas Advanced Computing Center, The University of Texas at Austin Department of Imaging Physics, The University of Texas M.D. Anderson Cancer Center |
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26 |
Numerical Simulations of an Array of Offshore Turbines and its Effect on the Local CirculationMiguel A. Guzmán-Hernández, Davis B. Archer, Umberto Ciri, Kianoosh Yousefi, and Stefano LeonardiDepartment of Mechanical Engineering, The University of Texas at Dallas Department of Mechanical Engineering, University of Puerto Rico at Mayaguez |
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27 |
A Data-Intensive Pipeline to Map the Human Brain Connections for Vision ScienceGabriele Amorosino, Junbeom Kwon, Bradley Caron, and Franco PestilliDepartment of Psychology and Department of Neuroscience, The University of Texas at Austin |
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28 |
From Petaflops to Fingertips: Interactive Spatial and Temporal Visualizations for the TACC Visitor CenterJared Galindo Hernandez, Dave Semeraro, and Greg AbramDepartment of Physics, The University of Texas at Austin Scalable Visualization Technologies, Texas Advanced Computing Center, The University of Texas at Austin |
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29 |
Aim4Active: Generating Theory-Driven Motivational Messages to Encourage Physical ActivityJack Pankaj and Chengkai LiDepartment of Computer Science and Engineering, The University of Texas at Arlington |
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30 |
A Scalable Machine Learning Workflow for Computing Higher-Order Force Constants with Automatic DifferentiationJaesuk Park and Feliciano GiustinoOden Institute for Computational Engineering and Sciences, The University of Texas at Austin Department of Physics, The University of Texas at Austin |
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31 |
HAFed: Improving Generalization with Harmony-Based Parameter Aggregation in Federated LearningAngel Peredo and Sergei ChuprovDepartment of Computer Science, The University of Texas Rio Grande Valley |
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32 |
Bayesian Optimization of PID Coefficients for Robust Federated LearningEi Ei Nyein Chan and Sergei ChuprovDepartment of Computer Science, The University of Texas Rio Grande Valley |
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33 |
Secure Federated Learning via Bayesian PID Control and Integrated Attack DetectionAdrian Peña and Sergei ChuprovDepartment of Computer Science, The University of Texas Rio Grande Valley |
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34 |
Investigating Deep Learning Architectures for Trustworthy Multimodal Autism DiagnosisAsmitha Dhamodharan and Yunhe FengDepartment of Computer Science and Engineering, University of North Texas |
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35 |
Ensemble-based Interpretation of Inter-well Tracer Tests for Residual Oil Saturation Estimation Using ESMDA and Fourier Neural OperatorsZihao Zhao, Y. Ou, C. Jia, R. Li, and Kishore MohantyHildebrand Department of Petroleum and Geosystems Engineering, The University of Texas at Austin King Abdullah University of Science and Technology |
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36 |
Investigating the Role of Small RNAs in Drought, Heat, and Combined Stress in Sorghum bicolorJavier Ramos, Lorena Martínez, Nabanita Chattopadhyay, Baibhav Kumar, and Manohar ChakrabartiSchool of Integrative Biological and Chemical Sciences, The University of Texas Rio Grande Valley |
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37 |
LLM-Guided Hypothesis Generation from Temporally Evolving Patent GraphsAlankrit MosesDepartment of Computer Science and Engineering, The University of Texas at Arlington |
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38 |
Pore-Scale Modeling of Wettability Alteration Induced by Low Salinity Water in Carbonates: A Physically Scalable ApproachRuoyu Li, Kishore Mohanty, and Qinjun KangDepartment of Petroleum and Geosystems Engineering, The University of Texas at Austin 2Los Alamos National Laboratory |
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39 |
Tissue Data Explorer: A Website Template for Presenting Tissue Sample Research FindingsJames Labyer, Erik Ferlanti, Martha Campbell-Thompson, Clayton E. Mathews, Wei-Jun Qian, and James P. CarsonTexas Advanced Computing Center, The University of Texas at Austin Department of Pathology, Immunology and Laboratory Medicine, University of Florida Biological Sciences Division, Pacific Northwest National Laboratory |
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40 |
Sparse Annotation is Sufficient for Bootstrapping Automatic Neuron SegmentationVijay Venu Thiyagarajan, Arlo Sheridan, Kristen M. Harris, and Uri ManorDepartment of Neuroscience, Center for Learning and Memory, The University of Texas at Austin Waitt Advanced Biophotonics Center, Salk Institute for Biological Studies Department of Cell & Developmental Biology, School of Biological Sciences, University of California, San Diego Halıcıoğlu Data Science Institute, University of California, San Diego |
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41 |
Designing Spike-Compatible Neural Networks for Low-Latency Inference on HPC PlatformsMd Asiful Hoque Prodhan and Sushil PrasadDepartment of Computer Science, The University of Texas at San Antonio |
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42 |
Computational Design of Chelation Strategies for Radiopharmaceutical ApplicationsBeibei Huang, Tran Ha Hoai Ngan, Zhiwen Liu, Shilpa Sharma, Coll Ryan Patrick, William Schuler, Ta Robert T, Jianbo Wang, Dimitra K. Georgiou, and H. Charles ManningDepartment of Cancer Systems Imaging, The University of Texas MD Anderson Cancer Center Cyclotron Radiochemistry Facility, The University of Texas MD Anderson Cancer Center Theranostics Drug Discovery Platform, RADIATE, Therapeutics Discovery Division, The University of Texas MD Anderson Cancer Center |
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43 |
GeneSieve: A Knowledge Network Interface for Gene Discovery Across Diverse Crop SpeciesPranav Umakant Pujar, Yen Duyen Le, Chengkai Li, Justin Vaughn, and Brian AbernathyDepartment of Computer Science and Engineering, The University of Texas at Arlington US Department. of Agriculture 3Department of Computer Science and Engineering, The University of Georgia, Athens |
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44 |
Shared Rank-One Matrix Pool for Multi-Task and Input-Specific Parameter-Efficient Fine-TuningAmin GhasemiDepartment of Computer Science, The University of Texas at Arlington |
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45 |
GraphNarrative + Orion: Graph-to-text models in Interactive Knowledge Graph Query FormulationQing Wang, Abhishek Divakar Goudar, Xiao Shi, Zhengyuan Zhu, Zeyu Zhang, Nandish Jayaram, Samiul Saeef, Farahnaz Akrami, and Chengkai LiDepartment of Computer Science, The University of Texas at Arlington |
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46 |
Prevalence and Parenting: Family Practices and Adolescent Mental Health in the U.S (NSCH 2018-2023)Aleena TomyDepartment of Computer Science, Texas State University |
